A B C D E F G H I J K L M N O P Q R S T U V W X Z

R

RANDOM - Static variable in class ncsa.tools.common.NCSAConstants

Expression operator: Math.random.

RANGED - Static variable in class ncsa.tools.events.util.Progress

READER_BUFFER_SIZE - Static variable in class ncsa.tools.common.NCSAConstants

Default size of internal buffers for BufferedReader.

RECURSIVE - Static variable in class ncsa.tools.common.util.CartesianProduct

RECV_BUFFER_SIZE - Static variable in class ncsa.tools.trebuchet.schemes.HTTP

RESOURCE - class ncsa.tools.trebuchet.schemes.RESOURCE.

Defines the 'resource:' URI scheme.

RESOURCE() - Constructor for class ncsa.tools.trebuchet.schemes.RESOURCE

RGHT - Static variable in class ncsa.tools.common.NCSAConstants

Expression operator: '>>'.

RINT - Static variable in class ncsa.tools.common.NCSAConstants

Expression function: Math.rint.

ROUND - Static variable in class ncsa.tools.common.NCSAConstants

Expression function: Math.round.

RUNNING - Static variable in interface ncsa.tools.events.ILocalEventProperty

ReadBinary - class ncsa.tools.ogrescript.file.tasks.ReadBinary.

ReadBinary() - Constructor for class ncsa.tools.ogrescript.file.tasks.ReadBinary

ReadBytes - class ncsa.tools.ogrescript.file.tasks.ReadBytes.

ReadBytes() - Constructor for class ncsa.tools.ogrescript.file.tasks.ReadBytes

ReadFromStream - class ncsa.tools.ogrescript.tasks.io.ReadFromStream.

ReadFromStream() - Constructor for class ncsa.tools.ogrescript.tasks.io.ReadFromStream

ReadInNamelist - class ncsa.tools.ogrescript.tasks.ReadInNamelist.

ReadInNamelist() - Constructor for class ncsa.tools.ogrescript.tasks.ReadInNamelist

ReadLines - class ncsa.tools.ogrescript.file.tasks.ReadLines.

ReadLines() - Constructor for class ncsa.tools.ogrescript.file.tasks.ReadLines

ReadNextLine - class ncsa.tools.ogrescript.tasks.io.ReadNextLine.

ReadNextLine() - Constructor for class ncsa.tools.ogrescript.tasks.io.ReadNextLine

Receive - class ncsa.tools.ogrescript.events.tasks.Receive.

Receive() - Constructor for class ncsa.tools.ogrescript.events.tasks.Receive

Redirect - class ncsa.tools.sss.types.Redirect.

Redirect() - Constructor for class ncsa.tools.sss.types.Redirect

Reference - class ncsa.tools.common.types.Reference.

Created by IntelliJ IDEA.

Reference(String) - Constructor for class ncsa.tools.common.types.Reference

Reference() - Constructor for class ncsa.tools.common.types.Reference

ReflectUtils - class ncsa.tools.common.util.ReflectUtils.

Provides convenience static wrappers around some of the standard Java reflection functionality.

ReflectionException - exception ncsa.tools.common.exceptions.ReflectionException.

ReflectionException() - Constructor for class ncsa.tools.common.exceptions.ReflectionException

ReflectionException(String, Throwable) - Constructor for class ncsa.tools.common.exceptions.ReflectionException

ReflectionException(String) - Constructor for class ncsa.tools.common.exceptions.ReflectionException

ReflectionException(Throwable) - Constructor for class ncsa.tools.common.exceptions.ReflectionException

RegExFilter - class ncsa.tools.common.types.filters.RegExFilter.

There are two options for usage: (a) set RegExp "tags" for the beginning and ending delimiters of the sequence; (b) set a single pattern to match on.

RegExFilter() - Constructor for class ncsa.tools.common.types.filters.RegExFilter

Initializes all OgreConstants.BIT_DEFAULT settings.

RegExFilterQueue - class ncsa.tools.common.types.filters.RegExFilterQueue.

Three types of queue configuration are available:

RegExFilterQueue() - Constructor for class ncsa.tools.common.types.filters.RegExFilterQueue

RelativeUriPath - class ncsa.tools.common.data.resource.RelativeUriPath.

RelativeUriPath() - Constructor for class ncsa.tools.common.data.resource.RelativeUriPath

RelativeUriPath(String) - Constructor for class ncsa.tools.common.data.resource.RelativeUriPath

RelativeUriPath(URI, URI, boolean) - Constructor for class ncsa.tools.common.data.resource.RelativeUriPath

RemoteAgent - class ncsa.tools.events.agents.RemoteAgent.

RemoteAgent() - Constructor for class ncsa.tools.events.agents.RemoteAgent

RemoteConnectionException - exception ncsa.tools.common.exceptions.RemoteConnectionException.

RemoteConnectionException() - Constructor for class ncsa.tools.common.exceptions.RemoteConnectionException

RemoteConnectionException(String, Throwable) - Constructor for class ncsa.tools.common.exceptions.RemoteConnectionException

RemoteConnectionException(String) - Constructor for class ncsa.tools.common.exceptions.RemoteConnectionException

RemoteConnectionException(Throwable) - Constructor for class ncsa.tools.common.exceptions.RemoteConnectionException

RemoteReceiverAgent - class ncsa.tools.events.agents.RemoteReceiverAgent.

RemoteReceiverAgent() - Constructor for class ncsa.tools.events.agents.RemoteReceiverAgent

RemoteSenderAgent - class ncsa.tools.events.agents.RemoteSenderAgent.

RemoteSenderAgent() - Constructor for class ncsa.tools.events.agents.RemoteSenderAgent

Remove - class ncsa.tools.ogrescript.tasks.core.Remove.

Remove() - Constructor for class ncsa.tools.ogrescript.tasks.core.Remove

Replace - class ncsa.tools.ogrescript.tasks.string.Replace.

Replace() - Constructor for class ncsa.tools.ogrescript.tasks.string.Replace

Replace - class ncsa.tools.ogrescript.types.Replace.

Replace() - Constructor for class ncsa.tools.ogrescript.types.Replace

Reset - class ncsa.tools.ogrescript.trebuchet.tasks.cache.Reset.

Requires a cache reference from the environment.

Reset() - Constructor for class ncsa.tools.ogrescript.trebuchet.tasks.cache.Reset

Resolvable - interface ncsa.tools.common.resolvable.Resolvable.

ResolvableActivator - class ncsa.tools.common.osgi.ResolvableActivator.

The activator class controls the plug-in life cycle

ResolvableActivator() - Constructor for class ncsa.tools.common.osgi.ResolvableActivator

The constructor

ResourceCopyClient - class ncsa.tools.trebuchet.resource.clients.ResourceCopyClient.

ResourceCopyClient() - Constructor for class ncsa.tools.trebuchet.resource.clients.ResourceCopyClient

ResourceLimit - class ncsa.tools.sss.types.ResourceLimit.

ResourceLimit() - Constructor for class ncsa.tools.sss.types.ResourceLimit

ResourceListClient - class ncsa.tools.trebuchet.resource.clients.ResourceListClient.

ResourceListClient() - Constructor for class ncsa.tools.trebuchet.resource.clients.ResourceListClient

ResourceMetadata - class ncsa.tools.common.types.uri.ResourceMetadata.

Descriptor for resources returned through class loader or from classpath.

ResourceMetadata() - Constructor for class ncsa.tools.common.types.uri.ResourceMetadata

Empty constructor.

ResourceMetadata(URI) - Constructor for class ncsa.tools.common.types.uri.ResourceMetadata

ResourceMetadata(String) - Constructor for class ncsa.tools.common.types.uri.ResourceMetadata

ResourceMetadata(URL) - Constructor for class ncsa.tools.common.types.uri.ResourceMetadata

ResourceRetrievalException - exception ncsa.tools.common.exceptions.ResourceRetrievalException.

ResourceRetrievalException() - Constructor for class ncsa.tools.common.exceptions.ResourceRetrievalException

ResourceRetrievalException(String, Throwable) - Constructor for class ncsa.tools.common.exceptions.ResourceRetrievalException

ResourceRetrievalException(String) - Constructor for class ncsa.tools.common.exceptions.ResourceRetrievalException

ResourceRetrievalException(Throwable) - Constructor for class ncsa.tools.common.exceptions.ResourceRetrievalException

ResourceType - class ncsa.tools.common.data.resource.ResourceType.

ResourceType() - Constructor for class ncsa.tools.common.data.resource.ResourceType

ResourceType(byte) - Constructor for class ncsa.tools.common.data.resource.ResourceType

ResourceType(char) - Constructor for class ncsa.tools.common.data.resource.ResourceType

ResourceURLParser - class ncsa.tools.trebuchet.resource.parsers.ResourceURLParser.

ResourceURLParser() - Constructor for class ncsa.tools.trebuchet.resource.parsers.ResourceURLParser

ResourceUtils - class ncsa.tools.common.util.ResourceUtils.

Utilities for retrieving resource information.

ResourceVerifyClient - class ncsa.tools.trebuchet.resource.clients.ResourceVerifyClient.

ResourceVerifyClient() - Constructor for class ncsa.tools.trebuchet.resource.clients.ResourceVerifyClient

Restart - class ncsa.tools.ogrescript.trebuchet.tasks.operation.Restart.

Restart() - Constructor for class ncsa.tools.ogrescript.trebuchet.tasks.operation.Restart

ReturnValuePlaceholder - class ncsa.tools.ogrescript.types.ReturnValuePlaceholder.

Return values have to be explicitly programmed (i.e., added to environment); default bahavior is that none are added.

ReturnValuePlaceholder() - Constructor for class ncsa.tools.ogrescript.types.ReturnValuePlaceholder

ReverseLookupEntry - class ncsa.tools.trebuchet.core.data.ReverseLookupEntry.

ReversibleComparator - class ncsa.tools.common.comparators.ReversibleComparator.

Base class providing sign value which can be used to reverse the comparison values if set (to get descending sort order).

ReversibleComparator() - Constructor for class ncsa.tools.common.comparators.ReversibleComparator

RmContact - class ncsa.tools.common.types.RmContact.

Describes host and service to contact to launch job remotely.

RmContact() - Constructor for class ncsa.tools.common.types.RmContact

RootProgressMonitor - class ncsa.tools.elf.core.types.RootProgressMonitor.

RootProgressMonitor(boolean) - Constructor for class ncsa.tools.elf.core.types.RootProgressMonitor

RootProgressMonitor(boolean, ChildListener) - Constructor for class ncsa.tools.elf.core.types.RootProgressMonitor

Rsl - class ncsa.tools.common.types.Rsl.

Globus-specific contact string describing command-line and environment.

Rsl() - Constructor for class ncsa.tools.common.types.Rsl

RunDescription - class ncsa.tools.common.types.RunDescription.

Maps an RSL description to a remote contact.

RunDescription() - Constructor for class ncsa.tools.common.types.RunDescription

RunException - exception ncsa.tools.elf.runtime.exceptions.RunException.

RunException(int, String, Throwable) - Constructor for class ncsa.tools.elf.runtime.exceptions.RunException

RunException(int, String) - Constructor for class ncsa.tools.elf.runtime.exceptions.RunException

RuntimeActivator - class ncsa.tools.elf.osgi.RuntimeActivator.

RuntimeActivator() - Constructor for class ncsa.tools.elf.osgi.RuntimeActivator

random - Static variable in class ncsa.tools.trebuchet.core.Trebuchet

read(File, long, long) - Static method in class ncsa.tools.common.util.FileUtils

readBytes(File, int, int) - Static method in class ncsa.tools.common.util.FileUtils

readFormatted(File, FileFormatType[], long, long, int) - Static method in class ncsa.tools.common.util.FileUtils

Calculates offset and number of bytes to read from set fields.

readIn(File) - Static method in class ncsa.tools.common.util.XmlUtils

readInNamelist(File) - Static method in class ncsa.tools.ogrescript.util.NamelistUtils

readLines(File, long, long, boolean) - Static method in class ncsa.tools.common.util.FileUtils

readLinesFromEnd(File, long, boolean) - Static method in class ncsa.tools.common.util.FileUtils

readLinesFromStart(File, long, boolean) - Static method in class ncsa.tools.common.util.FileUtils

readReply() - Method in class ncsa.tools.common.data.NCSAOutputPipe

Sets reply to empty after read.

redirectListAsString() - Method in class ncsa.tools.sss.types.Redirect

register(CopyClient, CopyClientPool) - Method in class ncsa.tools.trebuchet.core.util.CopyClientThreadPoolExecutor

registerAsActive(Future, CopyClient) - Method in class ncsa.tools.trebuchet.core.util.CopyClientPool

release(Future) - Method in class ncsa.tools.trebuchet.core.util.CopyClientPool

remove(Object) - Method in class ncsa.tools.common.data.HashCodeMap

remove(Property) - Method in class ncsa.tools.common.types.Configuration

remove(Namelist, List) - Static method in class ncsa.tools.ogrescript.util.NamelistUtils

removeChild(Node) - Method in interface ncsa.tools.common.Node

removeChild(Node) - Method in class ncsa.tools.common.types.BaseNode

removeChild(Node) - Method in class ncsa.tools.common.types.ThinNode

removeChildName(String) - Method in interface ncsa.tools.common.Node

removeChildName(String) - Method in class ncsa.tools.common.types.BaseNode

removeChildName(String) - Method in class ncsa.tools.common.types.ThinNode

removeConnections() - Method in class ncsa.tools.events.agents.RemoteAgent

removeConsumerAgent(LocalEventFilter) - Method in class ncsa.tools.events.util.LocalEventSupport

Shuts down agent for this filter.

removeConsumerHandler(LocalEventFilter, ILocalEventHandler) - Method in class ncsa.tools.events.util.LocalEventSupport

Removes handler for this filter.

removeDependency(Node) - Method in interface ncsa.tools.common.Node

removeDependency(Node) - Method in class ncsa.tools.common.types.BaseNode

removeDependency(Node) - Method in class ncsa.tools.common.types.ThinNode

removeDependencyName(String) - Method in interface ncsa.tools.common.Node

removeDependencyName(String) - Method in class ncsa.tools.common.types.BaseNode

removeDependencyName(String) - Method in class ncsa.tools.common.types.ThinNode

removeDir(String, SSHSession) - Static method in class ncsa.tools.common.util.SshUtils

Calls rmdir.

removeEntry(String) - Method in class ncsa.tools.ogrescript.OgreScriptEnvironment

Removes first matching name-value pair, starting at current frame.

removeGlobalEntry(String) - Method in class ncsa.tools.ogrescript.OgreScriptEnvironment

Removes name-value pair from global environement (frame 0).

removeHandler(ILocalEventHandler) - Method in class ncsa.tools.events.agents.LocalEventAgent

removeListener(IOperationListener) - Method in class ncsa.tools.ogrescript.process.trebuchet.types.actions.TrebuchetCopyTriggerAction

removeListener(IOperationListener) - Method in interface ncsa.tools.trebuchet.core.ICacheAgent

removeListener(IOperationListener) - Method in interface ncsa.tools.trebuchet.core.IOperation

removeListener(IOperationListener) - Method in class ncsa.tools.trebuchet.core.agents.cache.CacheAgent

removeListener(IOperationListener) - Method in class ncsa.tools.trebuchet.core.cache.OperationCache

removeListener(IUpdateOperationListener) - Method in class ncsa.tools.trebuchet.core.monitors.ScanningMonitor

removeListener(IOperationListener) - Method in class ncsa.tools.trebuchet.core.operations.Operation

removeProducerAgent(LocalEventFilter) - Method in class ncsa.tools.events.util.LocalEventSupport

Shuts down agent for this filter.

removeProducerHandler(LocalEventFilter, ILocalEventHandler) - Method in class ncsa.tools.events.util.LocalEventSupport

Removes handler for this filter.

removeProperty(String) - Method in class ncsa.tools.common.types.Configuration

removeSection(String) - Method in class ncsa.tools.common.namelist.Namelist

removeVariable(String) - Method in class ncsa.tools.common.namelist.Section

replace(String, Map) - Static method in class ncsa.tools.elf.core.utils.ElfPropertyHandler

replace(Namelist, List) - Static method in class ncsa.tools.ogrescript.util.NamelistUtils

replaceEnvVarNames(String[], String[], boolean) - Static method in class ncsa.tools.common.util.SystemUtils

Replaces occurrences of $NAME in arg with value if it is in the passed-in environment.

replaceType(String, String) - Static method in class ncsa.tools.common.util.FilterUtils

replaceType(Class, String) - Static method in class ncsa.tools.common.util.FilterUtils

replaceValue(String, String) - Method in class ncsa.tools.common.namelist.Section

report(String, String) - Static method in class ncsa.tools.events.util.Status

report(String, String, String) - Static method in class ncsa.tools.events.util.Status

report(String, String, String, String) - Static method in class ncsa.tools.events.util.Status

requeue(long) - Method in interface ncsa.tools.trebuchet.core.IOperationMonitor

requeue(long) - Method in class ncsa.tools.trebuchet.core.monitors.BlockingMonitor

requeue(long) - Method in class ncsa.tools.trebuchet.core.monitors.ScanningMonitor

requiresLocalHop(String, String, String) - Static method in class ncsa.tools.trebuchet.core.util.TrebuchetExtensionFactory

reset() - Method in class ncsa.tools.ogrescript.process.trebuchet.types.actions.TrebuchetCopyTriggerAction

reset() - Method in interface ncsa.tools.trebuchet.core.ICacheAgent

reset() - Method in class ncsa.tools.trebuchet.core.agents.cache.CacheAgent

reset() - Method in class ncsa.tools.trebuchet.core.cache.OperationCache

reset(long) - Method in class ncsa.tools.trebuchet.core.cache.OperationCache

Enabled only for read-only mode.

resetCount() - Method in class ncsa.tools.common.types.filters.RegExFilter

Sets count to 0.

resetCounts() - Method in class ncsa.tools.common.types.filters.RegExFilterQueue

Resets all filter match counts in the queue to 0.

resetState() - Method in class ncsa.tools.common.types.filters.RegExFilter

Sets matched sequences to null and state to UNMATCHED.

resetState() - Method in class ncsa.tools.common.types.filters.RegExFilterQueue

Resets all filter states in the queue.

resetToEnd() - Method in class ncsa.tools.trebuchet.core.cache.OperationCache

resetToLastEntry() - Method in class ncsa.tools.trebuchet.core.cache.OperationCache

resetToNthEntry(int) - Method in class ncsa.tools.trebuchet.core.cache.OperationCache

resolve(Configuration) - Method in interface ncsa.tools.common.resolvable.Resolvable

resolve(Configuration) - Method in class ncsa.tools.elf.core.BaseContainerModule

resolve(Configuration) - Method in class ncsa.tools.elf.core.modules.WorkDirModule

resolve(Configuration) - Method in class ncsa.tools.elf.scripts.modules.SerialScriptsModule

resolve(Configuration) - Method in class ncsa.tools.ogrescript.OgreScript

resolve(Configuration) - Method in class ncsa.tools.ogrescript.process.types.actions.AbstractTriggeredAction

resolve(Configuration) - Method in class ncsa.tools.ogrescript.process.types.triggers.AbstractTrigger

resourceAsString(String) - Static method in class ncsa.tools.common.util.ResourceUtils

Load a text resource file into memory as a String.

resourceAsString(String, String) - Static method in class ncsa.tools.common.util.ResourceUtils

resourceAsString(InputStream) - Static method in class ncsa.tools.common.util.ResourceUtils

resourceAsString(InputStream, String) - Static method in class ncsa.tools.common.util.ResourceUtils

restart(ConnectionMap) - Method in class ncsa.tools.events.util.LocalEventSupport

Closes all connections, and restarts with new settings.

restart() - Method in class ncsa.tools.trebuchet.core.TrebuchetRestart

Runs operation in same thread (blocks).

retrieveProcessIds() - Method in class ncsa.tools.common.data.UnixProcessReader

run() - Method in class ncsa.tools.common.util.GSSProxyRefreshDaemon

run(Object) - Method in class ncsa.tools.elf.osgi.ElfRuntime

run() - Method in class ncsa.tools.jms.localevent.JMSLocalEventReceiver

run() - Method in class ncsa.tools.jms.localevent.JMSLocalEventSender

run() - Method in class ncsa.tools.ogrescript.modules.ThreadedTaskExecutionModule

run() - Method in class ncsa.tools.ogrescript.process.trebuchet.types.FileMonitor

run() - Method in class ncsa.tools.ogrescript.process.types.StreamMonitor

run() - Method in class ncsa.tools.trebuchet.core.agents.cache.ScannedInputAgent

run() - Method in class ncsa.tools.trebuchet.core.clients.CopyClient

run() - Method in class ncsa.tools.trebuchet.core.clients.DeleteClient

run() - Method in class ncsa.tools.trebuchet.core.clients.MkDirClient

run() - Method in class ncsa.tools.trebuchet.core.clients.TouchClient

run() - Method in class ncsa.tools.trebuchet.core.converters.StagingConverter

run() - Method in class ncsa.tools.trebuchet.core.monitors.ScanningMonitor

run() - Method in class ncsa.tools.trebuchet.core.operations.Operation

runInternal() - Method in class ncsa.tools.trebuchet.core.operations.ScannedInputOperation

runTasks() - Method in class ncsa.tools.ogrescript.modules.SerialTaskExecutionModule

runTasks() - Method in class ncsa.tools.ogrescript.modules.SingleTaskExecutionModule

runTasks() - Method in class ncsa.tools.ogrescript.modules.TaskExecutionModule

running(IJobChangeEvent) - Method in class ncsa.tools.elf.core.listeners.LoggingJobChangeListener